BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F11LP1|AL425907
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1334 1613 0.0
>3x_Contig1334
Length = 7302
Score = 1613 bits (811), Expect = 0.0
Identities = 817/822 (99%)
Strand = Plus / Minus
Query: 1 tctnaaaaataccaataaaacaattaatagctacgatgaaagtgctatcgcagatgatga 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5648 tctaaaaaataccaataaaacaattaatagctacgatgaaagtgctatcgcagatgatga 5589
Query: 61 agaagatattcaaatgatggactcagagccagttgaatttgcaggcgagatggaaatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5588 agaagatattcaaatgatggactcagagccagttgaatttgcaggcgagatggaaatatg 5529
Query: 121 acatagcgtcaagcttcttcaagttttcaagcgacaatgctttcaattccaatagcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5528 acatagcgtcaagcttcttcaagttttcaagcgacaatgctttcaattccaatagcatca 5469
Query: 181 gtattccttctttgacagattgattgavataacccgatgtgtctaaccttgtattatatg 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5468 gtattccttctttgacagattgattgacataacccgatgtgtctaaccttgtattatatg 5409
Query: 241 gaattatctatccacaaaagaaaaaagtgacatcttctagataagatttgcgtcacataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5408 gaattatctatccacaaaagaaaaaagtgacatcttctagataagatttgcgtcacataa 5349
Query: 301 gcatattttggatccagctgtatttcttactgcgaattgcactctttgatataaacatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5348 gcatattttggatccagctgtatttcttactgcgaattgcactctttgatataaacatac 5289
Query: 361 ctttattcaacccactacctgggaatcttaaaacgaaacgttatttaagttatccataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5288 ctttattcaacccactacctgggaatcttaaaacgaaacgttatttaagttatccataga 5229
Query: 421 aggcagatgcaggaaaaattcatacttgttttcagttcctggaaatcaaaaatagcaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5228 aggcagatgcaggaaaaattcatacttgttttcagttcctggaaatcaaaaatagcaaaa 5169
Query: 481 ccttaattaagattatacatgatattmacctaacttctcatacataaagttaacaaaaga 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5168 ccttaattaagattatacatgatattaacctaacttctcatacataaagttaacaaaaga 5109
Query: 541 atagtgttcggcttcttaactgctctttgatttaattgtcattctcgaaagcgaggaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5108 atagtgttcggcttcttaactgctctttgatttaattgtcattctcgaaagcgaggaaaa 5049
Query: 601 aacattaaattaragctcagaggcggcttcttatctccagtaatgattctaattgtttcc 660
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5048 aacattaaattaaagctcagaggcggcttcttatctccagtaatgattctaattgtttcc 4989
Query: 661 cagcttggtcgaagttatttttcgacaaccagttcttaaaggcagtmcgagcaactgccc 720
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4988 cagcttggtcgaagttatttttcgacaaccagttcttaaaggcagtccgagcaactgccc 4929
Query: 721 attcttcgtcaatgatggaaaaccagcatgtgtctcgagttctttgtttgtaaatcattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4928 attcttcgtcaatgatggaaaaccagcatgtgtctcgagttctttgtttgtaaatcattg 4869
Query: 781 catttcggaacgtaccctcaaatttaaatccaagtctttgag 822
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4868 catttcggaacgtaccctcaaatttaaatccaagtctttgag 4827
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7572
Number of Sequences: 1807
Number of extensions: 7572
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)